Unlocking the therapeutic potential of RARRES-1: innovative treatment strategy for liver fibrosis through bioenergetics regulation
Access status:
Open Access
Type
ThesisThesis type
Doctor of PhilosophyAuthor/s
Irshad, IramAbstract
Background & aims: Liver fibrosis is ultimate outcome of all untreated liver-related diseases that can progress to cirrhosis, cancer and liver failure. Our epigenome-wide-association study suggested increased methylation at the RARRES-1 locus in metabolic dysfunction associated ...
See moreBackground & aims: Liver fibrosis is ultimate outcome of all untreated liver-related diseases that can progress to cirrhosis, cancer and liver failure. Our epigenome-wide-association study suggested increased methylation at the RARRES-1 locus in metabolic dysfunction associated fatty liver disease (MAFLD) patients with advanced fibrosis. Hypermethylation of RARRES-1 causes transcriptional silencing in various cancers. The functional status of RARRES-1 in liver fibrosis is unknown. Methods: The changes of RARRES-1 expression in liver fibrosis were investigated. Expression of RARRES-1 was restored by genome editing and pharmacological activation. The impact of RARRES1 on hepatic stellate cells activation and fibrosis was investigated at mRNA and protein levels using RTqPCR and immunofluorescence for the expression of fibrotic markers. Structural changes in mitochondria and autophagosomes with RARRES-1 activation were visualized using electron microscopy. Results: The mRNA expression of RARRES-1 by RTqPCR was found to be downregulated in human in-vitro culture model (p <0.01), multiple mouse fibrotic models (p <0.05, for all) and in two cohorts of patients with hepatitis C virus (HCV) (p <0.01) and MAFLD (p <0.0001). Genetic and pharmacological activation of RARRES-1 significantly reduced the mRNA expression of fibrotic markers, namely alpha SMA, COL1A1, CTGF & TGF-β (p <0.05, for all). Mechanistically I found that RARRES-1 reduces energy release during myofibroblast activation via regulating autophagy initiation, mitochondrial function and preserving lipid droplets. Discussion & conclusion: The data presented in this thesis indicates that the silencing of RARRES-1 is involved in liver fibrosis. Activation of RARRES-1 has the potential to reverse liver fibrosis by regulating ROS generation, autophagy, and lipid preservation. In conclusion, my findings highlight that regulating RARRES-1 may offer therapeutic benefits for treating liver fibrosis.
See less
See moreBackground & aims: Liver fibrosis is ultimate outcome of all untreated liver-related diseases that can progress to cirrhosis, cancer and liver failure. Our epigenome-wide-association study suggested increased methylation at the RARRES-1 locus in metabolic dysfunction associated fatty liver disease (MAFLD) patients with advanced fibrosis. Hypermethylation of RARRES-1 causes transcriptional silencing in various cancers. The functional status of RARRES-1 in liver fibrosis is unknown. Methods: The changes of RARRES-1 expression in liver fibrosis were investigated. Expression of RARRES-1 was restored by genome editing and pharmacological activation. The impact of RARRES1 on hepatic stellate cells activation and fibrosis was investigated at mRNA and protein levels using RTqPCR and immunofluorescence for the expression of fibrotic markers. Structural changes in mitochondria and autophagosomes with RARRES-1 activation were visualized using electron microscopy. Results: The mRNA expression of RARRES-1 by RTqPCR was found to be downregulated in human in-vitro culture model (p <0.01), multiple mouse fibrotic models (p <0.05, for all) and in two cohorts of patients with hepatitis C virus (HCV) (p <0.01) and MAFLD (p <0.0001). Genetic and pharmacological activation of RARRES-1 significantly reduced the mRNA expression of fibrotic markers, namely alpha SMA, COL1A1, CTGF & TGF-β (p <0.05, for all). Mechanistically I found that RARRES-1 reduces energy release during myofibroblast activation via regulating autophagy initiation, mitochondrial function and preserving lipid droplets. Discussion & conclusion: The data presented in this thesis indicates that the silencing of RARRES-1 is involved in liver fibrosis. Activation of RARRES-1 has the potential to reverse liver fibrosis by regulating ROS generation, autophagy, and lipid preservation. In conclusion, my findings highlight that regulating RARRES-1 may offer therapeutic benefits for treating liver fibrosis.
See less
Date
2024Rights statement
The author retains copyright of this thesis. It may only be used for the purposes of research and study. It must not be used for any other purposes and may not be transmitted or shared with others without prior permission.Faculty/School
Faculty of Medicine and Health, Westmead Clinical SchoolAwarding institution
The University of SydneySubjects
MAFLD Metabolic dysfunction associated fatty liver diseaseECM Extracellular matrix
ASIR Age-standardized death rate
CLD Chronic liver disease
GGT Gamma-glutamyl transferase
AST Aspartate aminotransferase
ALT Aspartate aminotransferase
MMP Matrix metalloproteinase
IGF Insulin-like growth factor
TIMP Tissue inhibitor of metalloproteinase
α2M α-2-macroglobulin
HA Hyaluronic acid
PIIINP Pro-collagen III N-terminal pro-peptide
HSCs Hepatic stellate cells
EMT Epithelial-to-mesenchymal transition
LSECs Liver sinusoidal endothelial cells
eNOS Endothelial-NO-synthase
NO Nitric oxide
TNF-α Tumor necrotic factor α
PDGF Platelet growth factor
SHH Sonic hedgehog
IGFs Insulin like growth factors
IL-6 Interleukin-6
TGF-β Tumor growth factor beta
MAPK Mitogen-activated protein kinase
JNK c-jun-N terminal kinase
TCA Tri-carboxylic acid
ETC Electron transport chain
Pal-1 Pro-fibrogenic mediators
mPTP Permeability transition pore
CCL4 Carbon tetrachloride
EWAS Epigenome wide association study
ROS Reactive oxygen species
DMEM Dulbecco’s Modified Eagle Medium
μl Microliter
PVDF Polyvinylidene difluoride
CCCP Carbonyl cyanide3-chlorophenyl hydrazone
GAPDH Glyceraldehyde-3-phosphate dehydrogenase
RTqPCR Polymerase chain reaction
HHSTEC Human hepatic stellate cells
HH Human hepatocytes
BDL Bile duct ligation
MCD Methionine and choline deficient
α-SMA Alpha-smooth muscle actin
COL1A1 Alpha-1-type I Collagen
CTGF Connective tissue growth factor
mPTP Mitochondrial-permeability–transition-pore
TEM Transmission electron microscope
TOM20 Outer mitochondrial membrane 20
MFN1 Mitofusin protein 1
TMRE Tetramethylrhodamine
ethyl ester
DCFDA 2’7’-dichlorofluorescin diacetate
mROS Mitochondrial ROS
ELISA Enzyme linked immunosorbent Assay
GFP Green fluorescent protein
RFP Red fluorescent protein
RARRES-1 Retinoic acid receptor responder 1
NADPH Nicotinamide adenine dinucleotide phosphate
mRNA Messenger RNA
Share